CDS

Accession Number TCMCG060C18319
gbkey CDS
Protein Id XP_015574070.1
Location join(25819..25887,26252..26374,28031..28188,29023..29067,29633..29711,29811..29884,30106..30212,31239..31421,31802..32002,32164..32377,32472..32546,32630..32979,33118..33307,33412..33664,33750..34089,34452..34632,34761..34901,35013..35274,35474..35926,36236..36696,37005..37150,37232..37413,37516..37908,38328..38453,38648..38713,38798..40599,40672..40951,41338..41571,41786..42310,42469..42601,43200..43456)
Gene LOC8285031
GeneID 8285031
Organism Ricinus communis

Protein

Length 2700aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA34677
db_source XM_015718584.2
Definition small subunit processome component 20 homolog [Ricinus communis]

EGGNOG-MAPPER Annotation

COG_category V
Description Small subunit processome component 20 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCGACGGCGTCTCATGCTCAGGCCGTCAAGTCACTCAATAAATCCCCTGGTGGCCGCCGCTTTGTTTTCAAGTCTTTGTCTCAGAGAATAGTAGAAATTGAAATTGATGTCTATAGAAGCCTTGATAAAGTCAAGTCTCAGCCATCTGAGGGGTCCTCCTTTTTCCGGGATTGCCTTGTAGAATGGAGGGAATTGAATACAGCAGAGGACTTCATCTCGTTTTATGAGAAGATGATGCCCTTAGTGCAGACATTACCTTTAATTCTATTGCACAAAGAATCAATTTTCTCAGAACTTCTTTCTAGATTACAAATGAAAGCACGTTTATCTCTTGAGCCTATTCTCAGGCTAATTGCAGCACTATCTAGAGATCTACTTGAAGATTTCATCTTCTTTTTGCCTAAGATTGTGGATTCATTTTCCTTTCTTCTAGAAAATGGTGCTGACAGGGAGCCAGAGATTATCGAGCAGATTTTTACATCATGGTCTTATATTCTGATGTATTTGCAAAAGTATCTTGTGAAGGATGTTGTTCACGTGCTCAAGGTGACAGAAAAATTAAGGTACTACCCAAAGGTTTATGTACAAGAATTTATGGCAGCGGCAACATCATTCTTGCTGAGAAGTGCTCCCAATGAGCAACTGAAAAAAGGCATTAGAAAGATCATGTTTGAGGTTGTGAAAAAGCCATTACTTGTGCGAAAACCTGGAGTTAGTGGCTTGCTATATCATACCATGAGAGGAACCCCTTCAAGATTCCATTCAAGAGCAGATCGGGTATTGCAGCTATTGACAGAAAGTTCAATATTTACTATTGGTGATAAGTTTGACCAAGGCGTGGACGTTATTATTGAAGTCATAACTTCTGCCTTTCAAAGAGAGTGTGAGGATATGGAACCAAAGGAATTAGCTATGTTGTGGAATTGTTTATATCAGAAAATAGAGAAGGCTCTAAATGATGACTACCGCCATCTAAGCTGCCTTCTATCACTGCTTATATCAACTGTCTCGATCCATGATGGGGCGAAGGTTTCTGATTACCAACCAATGATTGAACTAGTAAGGTCAATTGTTCAGAAGTTTGTTGTGTCATCTAGCATAGTGGTGGCAGAAGACAATTCTGAAGTTATTGATAAGGTTCTGCGGTTAATGCTGTGTATTCTTGATGGACTCAAGAGTTTCAATGATACATCTTCTATATCTTGCTGCTCATTCCACTGGGCTCCTGTGTTTGCACTAAGGAACTCGAGTTGTTTGACTTTTATTAGGGAACTGCTGGCAAAGGACACTTGTATAGTACATGCATTCAGAGTTAATATTTTAAGTGCGATGAATGATTTAATGGAAACTTCACAGAAGGAAGTTGTGTGCCTGCTTATGTCCTTCTGTGAGAGACTGCAAGAGGACTCTTTAGGCTCTGGCTTCTTAGATGGAACATCAGAAGAAGGGCTTTCAAGAATTCGTGGTTTTCTAAAGGGTACAATGTGCTCATGGGTTGGAATGATCAACAATATTACTCTCGGTAATCCATCATGTACTGTAATTAGCAAGGATGAGTTGGCTCTGCTATGGGGAGTCATCTGCTGCTATCCCTATATGATGGATATCCGAGAAAAGCCATCCTTGCTAATGGATTTCATAGATGCACTTGATGGCCTCTTGATGATTGGAGATGAAAGCATTGCTGGTGTTTCTAAACGTACTTGGCAAAGCCTGCTAGGAGCTGCTTTAAATTCCTATTTCAAATGTGGGAAAGAAGAATCTGGGCTTGAAGAGACGAGCAAAATTTTGTATCTTGCAAGAACATACAAATCATCCTCGCATATATTATCTGCTATTGCTGATTGTTTGGATTCCGTGCATGGGCCAACAATGGAGGCATATCGGAACCACATATCATATCATCCTGAGTTAGCAAGAAATAAGGCTGTGGATGCACTAGGCATATTTGCTAATAACTTGTGCAACTCAGACAAGGAAATTCGTGTTTCAACCCTAAGAATTCTGTGCCATTATCAATATCTAGACTCTGAAATATCTGCTGAAGATCGGCGTCCTGAGAAGAGAATGAAAACAGAAGTTGCTCAGACTCATCCTGCAGATATTTCTAGCATGGATGTTCTCCATCTCCTCCTCTCTATTGAGGCAACTCCTCTTTCAATTTCTACAAGCAGGAAAGTTATCCTATTAATCTCTAAAATGCAAATGGGCCTCTCTGCTGGAAGAATATCTAAAACTTACATACCTATTGTTTTGAGTGGAATAATAGGCATCTTCCACAACCGTTTCAGTTACCTGTGGAACCCGGCATCTGAGTGCCTTGCAGTTCTGATTGGGGAAAATGCGACACTTGTGTGGGACAAGTTTGTCCATTATTTTGAGAAATGTCTATCTGTATTTCAGTCATCCCATGATAAGCTTGATGGAGAAAATACTGAATTGCCTTACAAGTCCAATGAATTGATCGATCGTTTTAATTCTTTTGCTGTTCCTGAATCCGATAGCACGCCACATGCAACAGTTCTATCCTCATTGCTGCAGACTTTACAAAAAATTCCTTCTATAGCTGAGGCTCATTCTCGACAAATTGTACCGTTGTTCTTGAAGTATTTGGGCTACGAAAATGATGATCTTCACAGTGTGGGGTCATTCAATTCAGATTCTTGCAATGGCAAGGAGTGGAGGGGCGTCCTCAAAGAATGGTTGAACTTGTTCAGACTTATGCGGAACCCTAAGGCCTTTTACTGGAGTCAGTTCTTAAAAGATGTTTTGCTAATAAGGCTTATGGATGAAAACGATGCTGAAATCCAGATGAGGGTTCTTGATTGTCTCTTAACCTGGAAAGATGACTTTTTGCTCCCATATGAGGGGCATCTGAGAAACTTGATCAGTTCAAAACATTTAAGAGAAGAACTAACAACATGGAGTTTGAGCAGAGAATCTCTTCTAATTGAAGAAAGCCACAGAGCTAATCTCTTACCTCTAATTATTTTTCTTCTAATACCAAAAGTTAGGAAACCAAAGACACTTGCCTCTCGTAAGCATACAAGTGCACATCATCGGAAGGCAGTTCTTCGGTTCATAGCTGAACTTGATGTCAATGAGATTTCTCTTTTCTTTGCTTTGTTAATAAAGCCCTTGCATATTATATCAAATGGAGCTAATTCTACCATGGGTATGTTTTGGAGCTTACCCAAAAATTCCACTGTTGAACTTCAACCACTAAATATCTTGAAGTACTTCACCTTGGAGAATATTATGGCGCTCTCCTGGAAGAAGAAATATGGGTTTCTGCATGTCATTGAAGATATTCTTGGAGTTTTTGATGAGTCACATATCAGACCTTTTCTAGATTTGTTAATGGGATGCGTAATTCGAATGCTAAAAAGTTGCACTTCAAGTCTTGATGTTGCAAAGGCCACTGGAACTGAAGGTCATTCATCTGTCAATGTTCAATTGCATAAAGATGACAGTGCTGCAGTGAATAAATCCCTGACCAGCACAGCTCTGAAGCAGTTAAGGGATTTGAGGTCTTTGTGCCTGAAAATTGTTTCTGTTGTTCTCAACAAGTATGATGATCATGATTTTGGTTGCGATTTGTGGGACATGTTCTTCGCTTCAGTAAAATCTTTAGTTGATGGTTTCAAGCAGGAGGGTTGTAGTAGTGAGAAACCAAGTTCACTGTTCTCATGCTTTTTGGCTATGAGTAGCAGTCACCACCTTGTACCATTATTGTCTAGGGAAATGAATCTTGTTCCCGATATTTTCTCCATCCTGACTGTTACTACTGCCTCTGAGGCTATCAGGTCTTGTGTTCTTAAGTTCATTGACAACCTGTTGAATCTTGATGAAGAGTTGGATGAGGACAATAAAGTAAAAGATGTTCTACTTCCAAACCTTGATCAACTTATCAGCAGCTTGCACTGTTTCTTTCAGGGCAATAGAGCAACCAAGAGTTATACCGGGAAATTGGCCAAATATCCCGAGGAAATACACATTAGGATGTTCAAGATGTTGTCAAAGTACATCCGAGATCAATTGCAGTCGAACAAATTTTTGGATGTCCTGCTTCCATCGTTGGCTAAAAGATCCAAAGATTCTGGCGCCTCTGTTGAATGCTTGCAAGTCATTCGAGACATTATACCAGTGTTAGGAAATGAGAGCACTGCAAAAATTCTTAATGCTATCTCTCCACTTCTAATTTCTGTTGAATTGGATACGCGGTTGAATATTTGTGGTCTGCTTGATGCTCTTGCTAAAATTGATCCTTCTGTACTCTTTGTGGCAAAACTTATCCGTGAATTGAATGCAACCTCTACAGTGGAAATGGGTGGCCTTGATTATGACACCATAGTCAATGCTTATGCAAAGATTGATGTTGAGTTATTCTATTGCCTTCAAGAAGATCATGCATTAGTTGTCTTGTCACATTGTGTGTATGATATGTCATCAGAAGAGTTAATCTTAAGGCACAGTGCTTATAGGTCATTGCTTACGTTTGTCGAATTCTCCGCCGTGATTCTTGGTGTAGAAGCTAAAAGTCATTCTGGGACACCTCAGGTGATTACAGCAAAGAGCAAATGTAGTTGGACAACAACATGCCTTCAACGTTTAATGAACAAGTTCTTTTTGAAACACATGGGGAATGCAATGAGGGAAGGAAGTTCAGTTAGAAAGGAATGGATTGAGTTACTACGAGATATGGTGTTAAAACTTCCAGAAGTGGAGAATCTCAGTTACTTAAAGGCTCTGTGTTCTGCTGATGCCGAACAAGATTTTTTCAACAATATTATTCATTTGCAGAAACATAGGAGGGCAAAGGCACTTTCACGCTTTAGTAATGTTATCAATAAAACTAACATGTCAGAGGGCATCATGAATAAAGTGTTTGTTCCACTCTTTTTCAAAATGTTATTAGATGTACAAGGTGGAAAGGGAGAAAATATTAAATCTGCATGCCTTGAAGCTCTTGCTTCAATTGCCTCTCAGATGAAGTGGAAATCATATTACGCATTATTGACTCGATGCTTTCATGAGATGAAGATGAATTTGGATAAGCAGAAGGTTTTATTGCGGCTGGTTTGCTCAATGTTGGACCAGTTCCATTTTTCACAAAATTCTTCCTGTGAATTTGGCACTGATATCATGGAGACAGGTTCTTTAGCTACATTGCGCAAATGTGATAGTAATTCTGTTGTAGCTGCCGAGATACAGGCATGCCTTCATAAAACTGTGCTTCCAATGATGCAAAAGTTACTGGATTTCGATTCTGATAAGGTCAATGTTAATGTCAATGTGGCTGTTCTGAAAGTGTTGAAGTTGCTTCCTGGAGACATAATGGACTCGCAACTTCCAAGTATCATTCATCGCATTGCAAACCATTTAAAGAATCGGATGGAAAGCATCCGTGATGAAGCTAGGCTTGCTTTGGCTGCTTGTTTAAAGGAGCTTGGGCTGGAATATTTGAAGTTTATAGTCGGGGCCTTGAGAGCTACCTTGAAGCGAGGATATGAGCTTCATGTGTTGGGGTATACTCTGAACTTTATTTTGTCAAAATTTCTTTCATCTCCCATCTGTGGGAAATTGGATTATTGTTTGGAAGATCTCCTTTCTGTGGTAGAGAATGATATTCTTGGGGATGTTGGCGAGGAGAAAGATGTAGAAAAGATTGCTTCTAAAATGAAAGAAACTAGGAAGCTGAAGTCTTTTGATACATTGAAAATAATTGCACAAAGCATAACTTTTAAAAGTCATGGCTTGAAACTTCTGTCACCTATTAAATCTTATATGCAGAAGCATCTGACACCAAAAGTGAAAGCCAAATTGGAAACTATGTTAAATCAGATAGCGGCTGGTATTGAATGTAATCCATCTGTTGATCAGACAAATCTATTTATTTTTATTTATGGGTTTGTTGAAGATGGAGTCATTGAAGAAATTGGTCAGGGGGAGAATCCTTCTGGTACAGAGTTGATACCCTACTCTAGACATAATGTGCTTAAGAAAACAGTTTCTTCAACCCAAGTTGTTGGAACTAAATCAGGGTGCTCACATCTTATTACTGTGTTTGCTCTTGACTTATTCCACAACCGAATGAAGAGTGTGAAACTGGCTAAAGAAAATGCAGAACTTCTGTCAATGTTGGATCCCTTTGTTAAACTGTTTGGCAGCTGCTTGAGTTCTAGATATGAAGATATATTATCTTCATCCCTTAGATGCCTTACTCCACTGCTAAGGCTACCTCTACCATCACTTGTGTCACAGGCTGATAAAATAAAGGTGACATTATTAGATATTGCTCAGAGTTCTGTTAATGCCAACAATTCGCTGATGCAATCATGTCTAAAAATGTTAACTGTGCTCCTGCGAAGTACTAAAATCACCCTTTCATCTGATCAACTGCGTCTACTAATTCAGTTTCCGTTGTTTGTTGATCTTGAGAGCAATCCCTCTTTCATTACCCTCGCACTTCTAAAAGCAGTAGTTAGTCGCAAGCTGGTTGTTCCTGAGATATATGATGTTATGATTCGGATTGCAGAACTAATAGTTAGAAGCCAAGTGGATTCAATTCGTAAGAAATGCAGTCAGATTTCGTTGCAATTCTTACTTGATTATCATCTTTCAGAAACATACTTGCAACAGCATTTAGATTTTCTGCTGAAGAACTTAAGTTATGAGTATTCAACTGGGAGAGAAGCAGTGCTGGAAATGCTTCATGCCATAATAATCAAATTTCCCAGAAACTTTCTGGATAAACATGCACAAACAATATTTATCCATTTGGTGCAGTGCTTGGTGAATGACAATGATAGTAAAGTCCGTGCAATGGCTGCTACAGTTATAAAGCTTCTGATTGGACGAGTAAGTCCGCATTTACTGGATTCCATGCTCGATTTTAGTCTGTCCTGGTATGTGGATGAGAAGCGGCGATTGCAGAGTACTGGTGCACAGGCCTTGGGACTACTAGTCGAGGTCATGACTAAAAGCTTTCAAAAGCATATCAGCAGTATATTGCCTGTCAGTAGAACTATTTTGCAGGCTTCAGCTCATGTTGTTGCTGATAGACCATCACTAGATCTTTCTGTTGAAGTTGTTCCTCTATGGAAAGAAGCTTATTTTTCGTTAGTTTTGCTGGAGAAGATTCTGCATCATTTTCAACACCTCAGCTTCAAAAGGGATCTTGAGGATATATGGGAAGCAGTAAGCGAGTTGCTCTTACATCCACATCCATGGTTGCGCAACATATCAAGTCGCCTTGTGGCCTTTTACTTTGCTACTGCAACTAAGACCAGTAGGGAAAATCATGAAAAACCGTTGGGACATTTTCTCCTTATGAGGCCACATAGGCTTTTTATAATAGCTGCTTCCCTCTGCTATCAGCTAAAAACACAAGTCATTGATGATGCTGCTGAAAACCTGATTACACAGAATCTCGTTTTTACAGTTTGTGCCATCCATTCTTTGATGGGAAAAGCAGAATGTCCAGAACCTTATGTCTTCTGGACGGGTCTTGAACCACATGAACAGGGGCTATTTCTGAAAGCTTTTCAGTTGCTAGAGTCGAGAAAAGGAAAACATGTGTTTTTAAATGTCGTCTCTGGTGTACGTGATCAAGATGACAAAGACCAGCCTGAGAATCTCCAGTATCTGCTCGTCTCTAATTTAATCAAGGAGATGGGGAAAATTGCTCTTCAAATGGAGGCTATTCAGATGAAAATCATTTTTAATAGTTTTGGAAAGATTTCTTTGCAAATCAAGGACGATGGATTGCAGCGTTATGCATTTGACATGGTGCTGCCCTTCTATAAAGTTTGCGAAGGATTTGCTGGGAAAGTCATCTCTGATGACTTGAAGCAGCTAGCTCAAGAAGTTTGTGAGAGTATGCGGAACACTTTAGGCATCCAAAATTTTGTACAGGTTTATAGCGAGATAAGAAAGAGTATTAAGGTGAAGAGAGACAAGCGGAAAAAAGAGGAAAAGGTCATGGCCGTCGTCAACCCTATGCGAAATGCCAAGAGGAAGCTACGGAATGCAGCGAAACATCGTGCCCACAAGAAAAGGAAGATAATGACCATGAAAATGGGAAGATGGAGGCGTTGA
Protein:  
MATASHAQAVKSLNKSPGGRRFVFKSLSQRIVEIEIDVYRSLDKVKSQPSEGSSFFRDCLVEWRELNTAEDFISFYEKMMPLVQTLPLILLHKESIFSELLSRLQMKARLSLEPILRLIAALSRDLLEDFIFFLPKIVDSFSFLLENGADREPEIIEQIFTSWSYILMYLQKYLVKDVVHVLKVTEKLRYYPKVYVQEFMAAATSFLLRSAPNEQLKKGIRKIMFEVVKKPLLVRKPGVSGLLYHTMRGTPSRFHSRADRVLQLLTESSIFTIGDKFDQGVDVIIEVITSAFQRECEDMEPKELAMLWNCLYQKIEKALNDDYRHLSCLLSLLISTVSIHDGAKVSDYQPMIELVRSIVQKFVVSSSIVVAEDNSEVIDKVLRLMLCILDGLKSFNDTSSISCCSFHWAPVFALRNSSCLTFIRELLAKDTCIVHAFRVNILSAMNDLMETSQKEVVCLLMSFCERLQEDSLGSGFLDGTSEEGLSRIRGFLKGTMCSWVGMINNITLGNPSCTVISKDELALLWGVICCYPYMMDIREKPSLLMDFIDALDGLLMIGDESIAGVSKRTWQSLLGAALNSYFKCGKEESGLEETSKILYLARTYKSSSHILSAIADCLDSVHGPTMEAYRNHISYHPELARNKAVDALGIFANNLCNSDKEIRVSTLRILCHYQYLDSEISAEDRRPEKRMKTEVAQTHPADISSMDVLHLLLSIEATPLSISTSRKVILLISKMQMGLSAGRISKTYIPIVLSGIIGIFHNRFSYLWNPASECLAVLIGENATLVWDKFVHYFEKCLSVFQSSHDKLDGENTELPYKSNELIDRFNSFAVPESDSTPHATVLSSLLQTLQKIPSIAEAHSRQIVPLFLKYLGYENDDLHSVGSFNSDSCNGKEWRGVLKEWLNLFRLMRNPKAFYWSQFLKDVLLIRLMDENDAEIQMRVLDCLLTWKDDFLLPYEGHLRNLISSKHLREELTTWSLSRESLLIEESHRANLLPLIIFLLIPKVRKPKTLASRKHTSAHHRKAVLRFIAELDVNEISLFFALLIKPLHIISNGANSTMGMFWSLPKNSTVELQPLNILKYFTLENIMALSWKKKYGFLHVIEDILGVFDESHIRPFLDLLMGCVIRMLKSCTSSLDVAKATGTEGHSSVNVQLHKDDSAAVNKSLTSTALKQLRDLRSLCLKIVSVVLNKYDDHDFGCDLWDMFFASVKSLVDGFKQEGCSSEKPSSLFSCFLAMSSSHHLVPLLSREMNLVPDIFSILTVTTASEAIRSCVLKFIDNLLNLDEELDEDNKVKDVLLPNLDQLISSLHCFFQGNRATKSYTGKLAKYPEEIHIRMFKMLSKYIRDQLQSNKFLDVLLPSLAKRSKDSGASVECLQVIRDIIPVLGNESTAKILNAISPLLISVELDTRLNICGLLDALAKIDPSVLFVAKLIRELNATSTVEMGGLDYDTIVNAYAKIDVELFYCLQEDHALVVLSHCVYDMSSEELILRHSAYRSLLTFVEFSAVILGVEAKSHSGTPQVITAKSKCSWTTTCLQRLMNKFFLKHMGNAMREGSSVRKEWIELLRDMVLKLPEVENLSYLKALCSADAEQDFFNNIIHLQKHRRAKALSRFSNVINKTNMSEGIMNKVFVPLFFKMLLDVQGGKGENIKSACLEALASIASQMKWKSYYALLTRCFHEMKMNLDKQKVLLRLVCSMLDQFHFSQNSSCEFGTDIMETGSLATLRKCDSNSVVAAEIQACLHKTVLPMMQKLLDFDSDKVNVNVNVAVLKVLKLLPGDIMDSQLPSIIHRIANHLKNRMESIRDEARLALAACLKELGLEYLKFIVGALRATLKRGYELHVLGYTLNFILSKFLSSPICGKLDYCLEDLLSVVENDILGDVGEEKDVEKIASKMKETRKLKSFDTLKIIAQSITFKSHGLKLLSPIKSYMQKHLTPKVKAKLETMLNQIAAGIECNPSVDQTNLFIFIYGFVEDGVIEEIGQGENPSGTELIPYSRHNVLKKTVSSTQVVGTKSGCSHLITVFALDLFHNRMKSVKLAKENAELLSMLDPFVKLFGSCLSSRYEDILSSSLRCLTPLLRLPLPSLVSQADKIKVTLLDIAQSSVNANNSLMQSCLKMLTVLLRSTKITLSSDQLRLLIQFPLFVDLESNPSFITLALLKAVVSRKLVVPEIYDVMIRIAELIVRSQVDSIRKKCSQISLQFLLDYHLSETYLQQHLDFLLKNLSYEYSTGREAVLEMLHAIIIKFPRNFLDKHAQTIFIHLVQCLVNDNDSKVRAMAATVIKLLIGRVSPHLLDSMLDFSLSWYVDEKRRLQSTGAQALGLLVEVMTKSFQKHISSILPVSRTILQASAHVVADRPSLDLSVEVVPLWKEAYFSLVLLEKILHHFQHLSFKRDLEDIWEAVSELLLHPHPWLRNISSRLVAFYFATATKTSRENHEKPLGHFLLMRPHRLFIIAASLCYQLKTQVIDDAAENLITQNLVFTVCAIHSLMGKAECPEPYVFWTGLEPHEQGLFLKAFQLLESRKGKHVFLNVVSGVRDQDDKDQPENLQYLLVSNLIKEMGKIALQMEAIQMKIIFNSFGKISLQIKDDGLQRYAFDMVLPFYKVCEGFAGKVISDDLKQLAQEVCESMRNTLGIQNFVQVYSEIRKSIKVKRDKRKKEEKVMAVVNPMRNAKRKLRNAAKHRAHKKRKIMTMKMGRWRR